Hello Ok c'est noté. Reviens vers moi à ton retour, on regardera ensemble. Julien Le Wed, 25 Oct 2017 18:50:10 +0200, Mathieu Doray <mathieu.doray@ifremer.fr> a écrit :

Salut Julien,

Je reviens vers toi pour se prévoir un temps ensemble pour finaliser EchoBase Atlantos.

Il reste 2 choses à faire pour que l'export xml vers le site du CIEM soit opérationnel :

- il y a eu une (légère) modification du format xml requis (cf mail ci-dessous)

- il faut adapter le format des "SaCategory" au référentiel.

Je pense que ça va être chaud de voir ça d'ici la fin de l'année, mais j'anticipe pour qu'on puisse se trouver un moment en début d'année prochaine.

J'espère que ton intervention pourra être couverte par la maintenance non urgente que nous avions prévue pour le logiciel.

Je pars pour 10 jours mais serai dispo à partir du 06/11 pour en discuter.

Bonne soirée

Mathieu

-------- Message transféré -------- Sujet : Changes to the acoustic biotic format Date : Thu, 12 Jan 2017 09:17:17 +0000 De : Hjalte Parner <hjalte@ices.dk> Pour : Mathieu Doray <Mathieu.Doray@ifremer.fr> Copie à : Anna Osypchuk <anna.osypchuk@ices.dk>, Mehdi Abbasi <mehdi.abbasi@ices.dk>

Dear Mathieu,

Happy New Year – hope you have made it into the new year in good shape J

FYI We have experienced a few misinterpretation from some of the other groups when trying to make sense out of the current acoustic biotic format.

Therefore we have been forced to make the following changes to the format.

1.CatchSampleNumber has been replaced with CatchSpeciesCategory and will be mandatory both within the Catch and Biology records.

2.CatchCategoryWeight has been removed from the Catch records.

3.CatchSpeciesTotalWeight has been renamed to CatchSpeciesCategoryWeight.

4.CatchSpeciesTotalNumber has been renamed to CatchSpeciesCategoryNumber.

5.BiologyIndividualLength has been renamed to BiologyLengthClass.

As the changes primarily are related to rename of some of the biology fields, it shouldn’t make any major issues for you. The biggest change is that we apart from removing the CatchCategoryWeight, also have removed the CatchSampleNumber and replace that field with the original CatchSpeciesCategory which conceptually is the same and is mandatory both in the catch and biology records and should default to 1 if no categories are being used. The CatchSampleNumber simply created to many misunderstandings.

The next time you upload biotic files, please use the ‘new’ format which as always is described using the following link:

http://www.ices.dk/marine-data/Documents/Acoustic/ICES_Acoustic_data_format_...

We have already taken care of ‘transforming’ your current data within the acoustic database for you.

Don’t hesitate to contact us if you have any questions.

Best regards,

Hjalte

P.S. If you like a good example, you can just download you own biotic data file from data within database through the data portal.

Hjalte Parner Data Scientist

International Council for the Exploration of the Sea

Email hjalte.parner@ices.dk <mailto:hjalte.parner@ices.dk>

Web: www.ices.dk <http://www.ices.dk/>

Tel: +45 3338 6737

Fax: +45 3393 4215

H.C. Andersens Boulevard 44-46 1553 Copenhagen V. Denmark

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