April 2014 - Isis-fish-commits - mailman.cloud.codelutin.com

Build failed in Jenkins: isis-fish-nightly #1
by admin+ci-codelutin.com＠codelutin.com 03 Jun '14

03 Jun '14

See <http://ci.codelutin.com/jenkins/job/isis-fish-nightly/1/> ------------------------------------------ [...truncated 7961 lines...] <div id="members"> <ul> <li><a href="http://www.easter-eggs.com/">Easter-eggs</a></li> <li><a href="http://www.codelutin.com/">Code Lutin</a></li> <li><a href="http://www.entrouvert.com/">Entr'ouvert</a></li> <li><a href="http://www.ldd.fr/">Les Développements Durables</a></li> <li><a href="http://www.nereide.fr">Néréide</a></li> <li><a href="http://www.syloe.com/">Syloé</a></li> <li><a href="http://www.labor-liber.com/">labor-liber</a></li> <li><a href="http://www.cliss21.com/">Cliss XXI</a></li> <li><a href="http://www.silecs.info/">SILECS</a></li> <li><a href="http://www.libricks.fr/">Libricks</a></li> <li><a href="http://azae.net/">Azaé</a></li> <li><a href="http://www.scil.coop">SCIL</a></li> <li><a href="https://www.cadoles.com/">Cadoles</a></li> </ul> </div> </div> </div> </div> <div id="warpperhome" class="clearfix"> <div class="menu"> <div class="rightmenu"> <ul> <li class="level1"><div class="li"> <a href="/accueil" class="wikilink1" title="accueil">Accueil</a></div> </li> <li class="level1"><div class="li"> <a href="/nos_metiers" class="wikilink1" title="nos_metiers">Nos métiers</a></div> </li> <li class="level1"><div class="li"> <a href="/nos_valeurs" class="wikilink1" title="nos_valeurs">Nos valeurs</a></div> </li> <li class="level1"><div class="li"> <a href="/references" class="wikilink1" title="references"> Nos références</a></div> </li> <li class="level1"><div class="li"> <a href="/le_laboratoire" class="wikilink1" title="le_laboratoire">Le laboratoire</a></div> </li> <li class="level1"><div class="li"> <a href="/contact" class="wikilink1" title="contact">Contact</a></div> </li> </ul> </div> </div> <div id="warpper2"> <div class="maincontent"> <div class="margin">  <div class="page_left"> <h1 class="sectionedit1"><a name="cette_page_n_existe_pas_encore" id="cette_page_n_existe_pas_encore">Cette page n'existe pas encore</a></h1> <div class="level1"> <p> Vous avez suivi un lien vers une page qui n'existe pas encore. 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[ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException Sonar analysis completed: FAILURE Build step 'Sonar' changed build result to FAILURE Build step 'Sonar' marked build as failure

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Jenkins build is unstable: isis-fish-nightly » IsisFish #1
by admin+ci-codelutin.com＠codelutin.com 03 Jun '14

03 Jun '14

See <http://ci.codelutin.com/jenkins/job/isis-fish-nightly/fr.ifremer$isis-fish/…>

1 17

Jenkins build is unstable: isis-fish-ci #1
by admin+ci-codelutin.com＠codelutin.com 02 Jun '14

02 Jun '14

See <http://ci.codelutin.com/jenkins/job/isis-fish-ci/1/>

1 24

Jenkins build is unstable: isis-fish-ci » IsisFish #1
by admin+ci-codelutin.com＠codelutin.com 02 Jun '14

02 Jun '14

See <http://ci.codelutin.com/jenkins/job/isis-fish-ci/fr.ifremer$isis-fish/1/>

1 24

r3979 - trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher
by echatellier＠users.forge.codelutin.com 29 Apr '14

29 Apr '14

Author: echatellier Date: 2014-04-29 10:23:58 +0200 (Tue, 29 Apr 2014) New Revision: 3979 Url: http://forge.codelutin.com/projects/isis-fish/repository/revisions/3979 Log: Fix getUseCache parameter Modified: trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/InProcessSimulatorLauncher.java Modified: trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/InProcessSimulatorLauncher.java =================================================================== --- trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/InProcessSimulatorLauncher.java 2014-04-28 13:51:19 UTC (rev 3978) +++ trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/InProcessSimulatorLauncher.java 2014-04-29 08:23:58 UTC (rev 3979) @@ -509,7 +509,7 @@ String trace = context.getTrace().printStatisticAndClear(); simulation.getInformation().setStatistic(trace); } - if (param.getUseOptimization()) { + if (param.getUseCache()) { String cache = context.getCache().printStatistiqueAndClear(); simulation.getInformation().setOptimizationUsage(cache); }

1 0

r3978 - trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher
by echatellier＠users.forge.codelutin.com 28 Apr '14

28 Apr '14

Author: echatellier Date: 2014-04-28 15:51:19 +0200 (Mon, 28 Apr 2014) New Revision: 3978 Url: http://forge.codelutin.com/projects/isis-fish/repository/revisions/3978 Log: Add fixme Modified: trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/OptimizationPrepareJob.java Modified: trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/OptimizationPrepareJob.java =================================================================== --- trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/OptimizationPrepareJob.java 2014-04-28 13:35:20 UTC (rev 3977) +++ trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/OptimizationPrepareJob.java 2014-04-28 13:51:19 UTC (rev 3978) @@ -134,6 +134,7 @@ Thread.sleep(2000); } + // FIXME echatellier 20140418 exception is always false, it's value never changes if (!exception && !control.isStopSimulationRequest()) { optimization.endSimulation(optimizationContext); // close current generation simulations

1 0

r3977 - trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher
by echatellier＠users.forge.codelutin.com 28 Apr '14

28 Apr '14

Author: echatellier Date: 2014-04-28 15:35:20 +0200 (Mon, 28 Apr 2014) New Revision: 3977 Url: http://forge.codelutin.com/projects/isis-fish/repository/revisions/3977 Log: Copie des fonctions d'objectif de d'optimisation dans le zip de preparation (n?\195?\169c?\195?\169ssaire pour les necessaryResults) Modified: trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/SimulationService.java Modified: trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/SimulationService.java =================================================================== --- trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/SimulationService.java 2014-04-28 09:30:23 UTC (rev 3976) +++ trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/SimulationService.java 2014-04-28 13:35:20 UTC (rev 3977) @@ -66,6 +66,8 @@ import fr.ifremer.isisfish.IsisFish; import fr.ifremer.isisfish.IsisFishRuntimeException; import fr.ifremer.isisfish.datastore.ExportStorage; +import fr.ifremer.isisfish.datastore.ObjectiveStorage; +import fr.ifremer.isisfish.datastore.OptimizationStorage; import fr.ifremer.isisfish.datastore.RegionStorage; import fr.ifremer.isisfish.datastore.RuleStorage; import fr.ifremer.isisfish.datastore.ScriptStorage; @@ -78,6 +80,8 @@ import fr.ifremer.isisfish.export.SensitivityExport; import fr.ifremer.isisfish.mexico.MexicoHelper; import fr.ifremer.isisfish.rule.Rule; +import fr.ifremer.isisfish.simulator.Objective; +import fr.ifremer.isisfish.simulator.Optimization; import fr.ifremer.isisfish.simulator.SimulationControl; import fr.ifremer.isisfish.simulator.SimulationException; import fr.ifremer.isisfish.simulator.SimulationParameter; @@ -677,12 +681,13 @@ /** * Prepare les fichiers qui seront utilsé à la simulation: - * Prepare les fichiers qui seront utilsé à la simulation: * <ul> * <li> scripts</li> * <li> rules</li> * <li> exports</li> * <li> simulators</li> + * <li> optimisations</li> + * <li> objectives</li> * <li> export de la database de la region</li> * <li> simultionplan</li> * </ul> @@ -807,6 +812,30 @@ + File.separator + name)); } + // copie de la fonction d'objectif + Objective objective = param.getObjective(); + if (objective != null) { + String name = ObjectiveStorage.getName(objective); + File objectiveFile = new File(ObjectiveStorage.getObjectiveDirectory(), name + ".java"); + if (!objectiveFile.isFile()) { + objectiveFile = new File(ObjectiveStorage.getCommunityObjectiveDirectory(), name + ".java"); + } + FileUtils.copyFile(objectiveFile, new File(tmpDirectory, ObjectiveStorage.OBJECTIVE_PATH + + File.separator + name + ".java")); + } + + // copie du script d'optipmisation + Optimization optimization = param.getOptimization(); + if (optimization != null) { + String name = OptimizationStorage.getName(optimization); + File optimizationFile = new File(OptimizationStorage.getOptimizationDirectory(), name + ".java"); + if (!optimizationFile.isFile()) { + optimizationFile = new File(OptimizationStorage.getCommunityOptimizationDirectory(), name + ".java"); + } + FileUtils.copyFile(optimizationFile, new File(tmpDirectory, OptimizationStorage.OPTIMIZATION_PATH + + File.separator + name + ".java")); + } + // copie des export d'optimisation for (Export export : param.getOptimizationExportsObservations().keySet()) { String name = ExportStorage.getName(export);

1 0

r3976 - trunk/src/main/java/fr/ifremer/isisfish
by echatellier＠users.forge.codelutin.com 28 Apr '14

28 Apr '14

Author: echatellier Date: 2014-04-28 11:30:23 +0200 (Mon, 28 Apr 2014) New Revision: 3976 Url: http://forge.codelutin.com/projects/isis-fish/repository/revisions/3976 Log: Change configuration key to follow isis fish changes Modified: trunk/src/main/java/fr/ifremer/isisfish/IsisConfig.java Modified: trunk/src/main/java/fr/ifremer/isisfish/IsisConfig.java =================================================================== --- trunk/src/main/java/fr/ifremer/isisfish/IsisConfig.java 2014-04-28 08:58:10 UTC (rev 3975) +++ trunk/src/main/java/fr/ifremer/isisfish/IsisConfig.java 2014-04-28 09:30:23 UTC (rev 3976) @@ -1003,7 +1003,7 @@ /** Serveur accessible par ssh : remote tmp path */ SIMULATOR_SSH_TMPPATH("simulation.ssh.tmppath", n("isisfish.config.main.simulation.ssh.tmppath.description"), "isis-tmp"), /** Serveur accessible par SSH : emplacement de Java (full path) */ - SIMULATOR_SSH_JAVAPATH("simulation.ssh.javapath64", n("isisfish.config.main.simulation.ssh.javapath.description"), "/home3/caparmor/poussin/jdk7/bin/java"), + SIMULATOR_SSH_JAVAPATH("simulation.ssh.javapath430", n("isisfish.config.main.simulation.ssh.javapath.description"), "/home3/caparmor/poussin/jdk7/bin/java"), /** Serveur accessible par SSH : emplacement des executables pbs */ SIMULATOR_SSH_PBSBINPATH("simulation.ssh.pbsbinpath", n("isisfish.config.main.simulation.ssh.pbsbinpath.description"), "/usr/pbs/bin"), /** Serveur accessible par SSH : option de l'executable qsub (defaut to -m n = no mail) */

1 0

r3975 - trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher
by echatellier＠users.forge.codelutin.com 28 Apr '14

28 Apr '14

Author: echatellier Date: 2014-04-28 10:58:10 +0200 (Mon, 28 Apr 2014) New Revision: 3975 Url: http://forge.codelutin.com/projects/isis-fish/repository/revisions/3975 Log: Start optimisation simulation immediatelly Close simulation after end method call Modified: trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/OptimizationPrepareJob.java Modified: trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/OptimizationPrepareJob.java =================================================================== --- trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/OptimizationPrepareJob.java 2014-04-24 08:11:01 UTC (rev 3974) +++ trunk/src/main/java/fr/ifremer/isisfish/simulator/launcher/OptimizationPrepareJob.java 2014-04-28 08:58:10 UTC (rev 3975) @@ -110,7 +110,9 @@ int childNumber = childParam.getSimulationPlanNumber(); SimulationControl childControl = new SimulationControl(simId); SimulationItem item = new SimulationItem(childControl, childParam); - item.setStandaloneSimulation(false); + // FIXME set to true for now, but must be changed to run + // simulation optimisation by generation (not one by one) + item.setStandaloneSimulation(true); item.setSimulationNumber(childNumber); item.setSimulationZip(zip); @@ -134,6 +136,11 @@ if (!exception && !control.isStopSimulationRequest()) { optimization.endSimulation(optimizationContext); + // close current generation simulations + for (SimulationStorage sim : sims) { + sim.closeStorage(); + sim.closeMemStorage(); + } optimization.nextSimulation(optimizationContext); sims = optimizationContext.clearNextSimulation(); }

1 0

r3974 - in trunk/src/main/java/fr/ifremer/isisfish: datastore logging/console logging/io
by echatellier＠users.forge.codelutin.com 24 Apr '14

24 Apr '14

Author: echatellier Date: 2014-04-24 10:11:01 +0200 (Thu, 24 Apr 2014) New Revision: 3974 Url: http://forge.codelutin.com/projects/isis-fish/repository/revisions/3974 Log: Fix finalize Modified: trunk/src/main/java/fr/ifremer/isisfish/datastore/DataStorage.java trunk/src/main/java/fr/ifremer/isisfish/datastore/ResultMappedStorage.java trunk/src/main/java/fr/ifremer/isisfish/logging/console/LogConsoleHandler.java trunk/src/main/java/fr/ifremer/isisfish/logging/io/LineReader.java Modified: trunk/src/main/java/fr/ifremer/isisfish/datastore/DataStorage.java =================================================================== --- trunk/src/main/java/fr/ifremer/isisfish/datastore/DataStorage.java 2014-04-18 13:54:36 UTC (rev 3973) +++ trunk/src/main/java/fr/ifremer/isisfish/datastore/DataStorage.java 2014-04-24 08:11:01 UTC (rev 3974) @@ -366,8 +366,11 @@ */ @Override protected void finalize() throws Throwable { - super.finalize(); - closeStorage(); + try { + closeStorage(); + } finally { + super.finalize(); + } } } Modified: trunk/src/main/java/fr/ifremer/isisfish/datastore/ResultMappedStorage.java =================================================================== --- trunk/src/main/java/fr/ifremer/isisfish/datastore/ResultMappedStorage.java 2014-04-18 13:54:36 UTC (rev 3973) +++ trunk/src/main/java/fr/ifremer/isisfish/datastore/ResultMappedStorage.java 2014-04-24 08:11:01 UTC (rev 3974) @@ -442,8 +442,11 @@ @Override protected void finalize() throws Throwable { - super.finalize(); - raf.close(); + try { + raf.close(); + } finally { + super.finalize(); + } } @Override Modified: trunk/src/main/java/fr/ifremer/isisfish/logging/console/LogConsoleHandler.java =================================================================== --- trunk/src/main/java/fr/ifremer/isisfish/logging/console/LogConsoleHandler.java 2014-04-18 13:54:36 UTC (rev 3973) +++ trunk/src/main/java/fr/ifremer/isisfish/logging/console/LogConsoleHandler.java 2014-04-24 08:11:01 UTC (rev 3974) @@ -158,8 +158,11 @@ @Override protected void finalize() throws Throwable { - super.finalize(); - close(); + try { + close(); + } finally { + super.finalize(); + } } /** Modified: trunk/src/main/java/fr/ifremer/isisfish/logging/io/LineReader.java =================================================================== --- trunk/src/main/java/fr/ifremer/isisfish/logging/io/LineReader.java 2014-04-18 13:54:36 UTC (rev 3973) +++ trunk/src/main/java/fr/ifremer/isisfish/logging/io/LineReader.java 2014-04-24 08:11:01 UTC (rev 3974) @@ -339,8 +339,11 @@ @Override protected void finalize() throws Throwable { - super.finalize(); - close(); + try { + close(); + } finally { + super.finalize(); + } } protected void ensureOpen() {

1 0