INFO [main] (IsisFish.java:125) main - Starting Isis-Fish 4.2.1.0 with args : []
 INFO [main] (IsisFish.java:126) main - Date: 20/12/12 11:26
 INFO [main] (IsisFish.java:127) main - Java version: 1.6.0_31-b05, Java HotSpot(TM) Client VM
 INFO [main] (IsisFish.java:128) main - System arch: x86
 INFO [main] (IsisFish.java:129) main - R_HOME: null, R.type: jni
 INFO [main] (IsisFish.java:130) main - PATH: C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\Program Files\ATI Technologies\ATI.ACE\Core-Static;C:\Program Files\MiKTeX 2.9\miktex\bin\
 INFO [main] (IsisFish.java:131) main - java.library.path: jri
 INFO [main] (IsisFish.java:332) initVCS - Check state of local repository: C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database
 INFO [main] (VCSSVN.java:143) getSVNManager - Try to connect to http://svn.forge.codelutin.com/svn/isis-fish-data
 INFO [main] (VCSSVN.java:231) isConnected - Connexion au serveur disponible, passage en mode connect� : http://svn.forge.codelutin.com/svn/isis-fish-data
 INFO [main] (VCSSVN.java:143) getSVNManager - Try to connect to http://smahevas@svn.forge.codelutin.com/svn/isis-fish-community
 INFO [main] (VCSSVN.java:231) isConnected - Connexion au serveur disponible, passage en mode connect� : http://smahevas@svn.forge.codelutin.com/svn/isis-fish-community
 INFO [main] (IsisFish.java:161) main - after init done in 11.469.
 INFO [main] (SimulationExecutor.java:78) <init> - SimulationExecutor started with 2 thread for dans un sous processus
 INFO [main] (SimulationExecutor.java:78) <init> - SimulationExecutor started with 1 thread for sur le serveur Caparmor
 INFO [main] (SimulationExecutor.java:78) <init> - SimulationExecutor started with 1 thread for dans le m�me processus
 INFO [main] (IsisTray.java:117) getInstance - Use system tray: fr.ifremer.isisfish.IsisTray$AWTSystemTray
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:1: class, interface, or enum expected
<<<<<<< .mine
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:239: class, interface, or enum expected
=======
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:263: class, interface, or enum expected
import static org.nuiton.i18n.I18n._;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:265: class, interface, or enum expected
import org.apache.commons.logging.Log;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:266: class, interface, or enum expected
import org.apache.commons.logging.LogFactory;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:267: class, interface, or enum expected
import org.nuiton.math.matrix.MatrixIterator;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:268: class, interface, or enum expected
import org.nuiton.math.matrix.MatrixND;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:270: class, interface, or enum expected
import scripts.ResultName;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:271: class, interface, or enum expected
import fr.ifremer.isisfish.entities.Metier;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:272: class, interface, or enum expected
import fr.ifremer.isisfish.entities.MetierSeasonInfo;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:273: class, interface, or enum expected
import fr.ifremer.isisfish.entities.Population;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:274: class, interface, or enum expected
import fr.ifremer.isisfish.entities.PopulationGroup;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:275: class, interface, or enum expected
import fr.ifremer.isisfish.entities.Species;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:276: class, interface, or enum expected
import fr.ifremer.isisfish.entities.TargetSpecies;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:277: class, interface, or enum expected
import fr.ifremer.isisfish.rule.AbstractRule;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:278: class, interface, or enum expected
import fr.ifremer.isisfish.simulator.PopulationMonitor;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:279: class, interface, or enum expected
import fr.ifremer.isisfish.simulator.SimulationContext;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:280: class, interface, or enum expected
import fr.ifremer.isisfish.types.TimeStep;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:281: class, interface, or enum expected
import fr.ifremer.isisfish.util.Doc;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:474: class, interface, or enum expected
>>>>>>> .r293
^
20 errors
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\simulationplans\calibration2paramtransfo3param.java:66: param_nomfichier_debarquements is already defined in simulationplans.calibration2paramtransfo3param
	public String param_nomfichier_debarquements = "C:/StephAncienPortableDisqueD/SimulationsISIS/Calibration/MerluLangoustineGdG/MerluCapturesDebFinalenkilos2003SScol1.csv";//in row : time ; in columns : age or length group
	              ^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\simulationplans\calibration2paramtransfo3param.java:98: cannot find symbol
symbol  : variable debarquementsObserves
location: class simulationplans.calibration2paramtransfo3param
    		debarquementsObserves = FileUtil.getFile(".*.csv", "fichier csv separateur ';'");
    		^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\simulationplans\calibration2paramtransfo3param.java:100: cannot find symbol
symbol  : variable debarquementsObserves
location: class simulationplans.calibration2paramtransfo3param
    		debarquementsObserves = new File(param_nomfichier_debarquements);
    		^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\simulationplans\calibration2paramtransfo3param.java:114: cannot find symbol
symbol  : variable matrixDebarquement
location: class simulationplans.calibration2paramtransfo3param
	matrixDebarquement = MatrixFactory.getInstance().create(dimMatrix);
	^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\simulationplans\calibration2paramtransfo3param.java:120: cannot find symbol
symbol  : variable debarquementsObserves
location: class simulationplans.calibration2paramtransfo3param
    	matrixDebarquement.importCSV(new FileReader(debarquementsObserves),new int []{0,0});
    	                                            ^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\simulationplans\calibration2paramtransfo3param.java:120: cannot find symbol
symbol  : variable matrixDebarquement
location: class simulationplans.calibration2paramtransfo3param
    	matrixDebarquement.importCSV(new FileReader(debarquementsObserves),new int []{0,0});
    	^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\simulationplans\calibration2paramtransfo3param.java:121: cannot find symbol
symbol  : variable matrixDebarquement
location: class simulationplans.calibration2paramtransfo3param
    	matrixDebarquement=matrixDebarquement.reduce();
    	^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\simulationplans\calibration2paramtransfo3param.java:121: cannot find symbol
symbol  : variable matrixDebarquement
location: class simulationplans.calibration2paramtransfo3param
    	matrixDebarquement=matrixDebarquement.reduce();
    	                   ^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\simulationplans\calibration2paramtransfo3param.java:122: cannot find symbol
symbol  : variable matrixDebarquement
location: class simulationplans.calibration2paramtransfo3param
		log.info("MatrixDebarquement : " + matrixDebarquement);
		                                   ^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\simulationplans\calibration2paramtransfo3param.java:335: cannot find symbol
symbol  : variable matrixDebarquement
location: class simulationplans.calibration2paramtransfo3param
log.info("dim de obs" + " " + Arrays.toString(matrixDebarquement.getDim()));
                                              ^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\simulationplans\calibration2paramtransfo3param.java:343: cannot find symbol
symbol  : variable matrixDebarquement
location: class simulationplans.calibration2paramtransfo3param
            double obs = matrixDebarquement.getValue(dim);
                         ^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\simulationplans\calibration2paramtransfo3param.java:355: warning: [deprecation] writeString(java.io.File,java.lang.String) in org.nuiton.util.FileUtil has been deprecated
org.nuiton.util.FileUtil.writeString(exportHistoric, exportHisto);
                        ^
Note: C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\simulationplans\calibration2paramtransfo3param.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
11 errors
1 warning
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:1: class, interface, or enum expected
<<<<<<< .mine
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:239: class, interface, or enum expected
=======
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:263: class, interface, or enum expected
import static org.nuiton.i18n.I18n._;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:265: class, interface, or enum expected
import org.apache.commons.logging.Log;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:266: class, interface, or enum expected
import org.apache.commons.logging.LogFactory;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:267: class, interface, or enum expected
import org.nuiton.math.matrix.MatrixIterator;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:268: class, interface, or enum expected
import org.nuiton.math.matrix.MatrixND;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:270: class, interface, or enum expected
import scripts.ResultName;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:271: class, interface, or enum expected
import fr.ifremer.isisfish.entities.Metier;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:272: class, interface, or enum expected
import fr.ifremer.isisfish.entities.MetierSeasonInfo;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:273: class, interface, or enum expected
import fr.ifremer.isisfish.entities.Population;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:274: class, interface, or enum expected
import fr.ifremer.isisfish.entities.PopulationGroup;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:275: class, interface, or enum expected
import fr.ifremer.isisfish.entities.Species;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:276: class, interface, or enum expected
import fr.ifremer.isisfish.entities.TargetSpecies;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:277: class, interface, or enum expected
import fr.ifremer.isisfish.rule.AbstractRule;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:278: class, interface, or enum expected
import fr.ifremer.isisfish.simulator.PopulationMonitor;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:279: class, interface, or enum expected
import fr.ifremer.isisfish.simulator.SimulationContext;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:280: class, interface, or enum expected
import fr.ifremer.isisfish.types.TimeStep;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:281: class, interface, or enum expected
import fr.ifremer.isisfish.util.Doc;
^
C:\StephAncienPortableDisqueD\SimulationsISIS\isis-fish-4\isis-database\rules\TailleMin.java:474: class, interface, or enum expected
>>>>>>> .r293
^
20 errors
 INFO [Thread-9] (CronService.java:84) run - Starting 1 registered services