Re: [Isis-fish-users] Pb lancement AS - résolu! ;)

25 Jan 2011


      Merci!

Pb dans le chemin du R_HOME


Sigrid.Lehuta@ifremer.fr a écrit :
...
Bonjour, on essaie de lancer une AS mais on a un pb!
On a bien créé le R_HOME et le path mais isis se ferme directement  
au lancement de l'analyse de sensibilité.
Voici le debug.
Une idée?
Merci
INFO [main] (IsisFish.java:314) init - Starting Isis-Fish with args : []
 INFO [main] (IsisFish.java:315) init - Date: 25/01/11 14:31
 INFO [main] (IsisFish.java:316) init - Java version: 1.6.0_20-b02
 INFO [main] (IsisFish.java:317) init - Java VM: Java HotSpot(TM) Client VM
 INFO [main] (IsisFish.java:318) init - System arch: x86
 INFO [main] (IsisFish.java:319) init - R_HOME: W:\R\bin\
 INFO [main] (IsisFish.java:320) init - R.type: jni
 INFO [main] (IsisFish.java:321) init - PATH:  
C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\system32\WBEM;C:\Program  
Files\ATI Technologies\ATI.ACE\Core-Static;W:\R\bin
 INFO [main] (URLConverter.java:68) <init> -  
org.nuiton.util.URLConverter@765a16
 INFO [main] (ConverterUtil.java:163) initConverters - register  
converter org.nuiton.util.URLConverter@765a16
 INFO [main] (ConverterUtil.java:163) initConverters - register  
converter org.nuiton.util.URIConverter@cbf30e
 INFO [main] (ConverterUtil.java:163) initConverters - register  
converter org.nuiton.util.VersionConverter@1431340
 INFO [main] (ConverterUtil.java:163) initConverters - register  
converter org.nuiton.util.LocaleConverter@134f69a
 INFO [main] (ApplicationConfig.java:1028) parse - Chargement du  
fichier de config: D:\Documents and Settings\invhal\.isis-config-3
 INFO [main] (IsisConfig.java:907) parse - Check configuration change
 INFO [main] (IsisConfig.java:932) parse - Config file migration done
 INFO [main] (Resource.java:361) getURLs - search URLs pattern:  
.*i18n/.+\.properties in 9 urls in 219,569ms
 INFO [main] (I18nLoader.java:162) init - 9 bundle(s) found, [18  
file(s)] in 5,009ms
 INFO [main] (I18nLoader.java:233) addLanguage - Language <locale:  
fr_FR,nbStences:1325>, nbEntries: 9, nbSentences: 1325 in 12,739ms
 INFO [main] (IsisFish.java:434) initVCS - Check state of local  
repository: D:\Documents and Settings\invhal\isis-database-3
 INFO [main] (VCSSVN.java:135) getSVNManager - Try to connect to  
svn://labs.libre-entreprise.org/svnroot/isis-fish-data
 INFO [main] (VCSSVN.java:223) isConnected - Connexion au serveur  
disponible, passage en mode connecté :  
svn://labs.libre-entreprise.org/svnroot/isis-fish-data/
 INFO [main] (IsisFish.java:142) main - after init done in 2.094.
 INFO [main] (SimulationExecutor.java:72) <init> -  
SimulationExecutor started with 2 thread for dans un sous processus
 INFO [main] (SimulationExecutor.java:72) <init> -  
SimulationExecutor started with 1 thread for sur le serveur Caparmor
 INFO [main] (SimulationExecutor.java:72) <init> -  
SimulationExecutor started with 1 thread for dans le même processus
 INFO [main] (IsisTray.java:110) getInstance - Use system tray:  
fr.ifremer.isisfish.IsisTray$AWTSystemTray
 INFO [main] (Editor.java:121) addEditor - Can't find your editor  
class: org.nuiton.widget.editor.SDocEditor
 INFO [main] (Editor.java:121) addEditor - Can't find your editor  
class: org.nuiton.widget.editor.JEditEditor
 INFO [main] (CompileHelper.java:116) loadClass - Can't load class:  
exports.BiomassRelative
java.lang.ClassNotFoundException: exports.BiomassRelative
  at java.net.URLClassLoader$1.run(Unknown Source)
  at java.security.AccessController.doPrivileged(Native Method)
  at java.net.URLClassLoader.findClass(Unknown Source)
  at java.lang.ClassLoader.loadClass(Unknown Source)
  at java.lang.ClassLoader.loadClass(Unknown Source)
  at fr.ifremer.isisfish.util.CompileHelper.loadClass(CompileHelper.java:114)
  at  
fr.ifremer.isisfish.datastore.JavaSourceStorage.getCodeClass(JavaSourceStorage.java:140)
  at  
fr.ifremer.isisfish.datastore.JavaSourceStorage.getNewInstance(JavaSourceStorage.java:155)
  at  
fr.ifremer.isisfish.datastore.ExportStorage.getNewExportInstance(ExportStorage.java:92)
  at  
fr.ifremer.isisfish.ui.models.export.ExportNameListRenderer.getListCellRendererComponent(ExportNameListRenderer.java:82)
  at javax.swing.plaf.basic.BasicListUI.updateLayoutState(Unknown Source)
  at javax.swing.plaf.basic.BasicListUI.maybeUpdateLayoutState(Unknown Source)
  at javax.swing.plaf.basic.BasicListUI.getPreferredSize(Unknown Source)
  at javax.swing.JComponent.getPreferredSize(Unknown Source)
  at javax.swing.JList.getPreferredScrollableViewportSize(Unknown Source)
  at javax.swing.ViewportLayout.preferredLayoutSize(Unknown Source)
  at java.awt.Container.preferredSize(Unknown Source)
  at java.awt.Container.getPreferredSize(Unknown Source)
  at javax.swing.JComponent.getPreferredSize(Unknown Source)
  at javax.swing.ScrollPaneLayout.preferredLayoutSize(Unknown Source)
  at java.awt.Container.preferredSize(Unknown Source)
  at java.awt.Container.getPreferredSize(Unknown Source)
  at javax.swing.JComponent.getPreferredSize(Unknown Source)
  at java.awt.GridBagLayout.GetLayoutInfo(Unknown Source)
  at java.awt.GridBagLayout.getLayoutInfo(Unknown Source)
  at java.awt.GridBagLayout.ArrangeGrid(Unknown Source)
  at java.awt.GridBagLayout.arrangeGrid(Unknown Source)
  at java.awt.GridBagLayout.layoutContainer(Unknown Source)
  at java.awt.Container.layout(Unknown Source)
  at java.awt.Container.doLayout(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validate(Unknown Source)
  at java.awt.Window.show(Unknown Source)
  at java.awt.Component.show(Unknown Source)
  at java.awt.Component.setVisible(Unknown Source)
  at java.awt.Window.setVisible(Unknown Source)
  at fr.ifremer.isisfish.IsisFish.launchUI(IsisFish.java:631)
  at fr.ifremer.isisfish.IsisFish.main(IsisFish.java:150)
 INFO [main] (CompileHelper.java:116) loadClass - Can't load class:  
exports.BiomassRelative
java.lang.ClassNotFoundException: exports.BiomassRelative
  at java.net.URLClassLoader$1.run(Unknown Source)
  at java.security.AccessController.doPrivileged(Native Method)
  at java.net.URLClassLoader.findClass(Unknown Source)
  at java.lang.ClassLoader.loadClass(Unknown Source)
  at java.lang.ClassLoader.loadClass(Unknown Source)
  at fr.ifremer.isisfish.util.CompileHelper.loadClass(CompileHelper.java:114)
  at  
fr.ifremer.isisfish.datastore.JavaSourceStorage.getCodeClass(JavaSourceStorage.java:140)
  at  
fr.ifremer.isisfish.datastore.JavaSourceStorage.getNewInstance(JavaSourceStorage.java:155)
  at  
fr.ifremer.isisfish.datastore.ExportStorage.getNewExportInstance(ExportStorage.java:92)
  at  
fr.ifremer.isisfish.ui.models.export.ExportNameListRenderer.getListCellRendererComponent(ExportNameListRenderer.java:82)
  at javax.swing.plaf.basic.BasicListUI.updateLayoutState(Unknown Source)
  at javax.swing.plaf.basic.BasicListUI.maybeUpdateLayoutState(Unknown Source)
  at javax.swing.plaf.basic.BasicListUI.getPreferredSize(Unknown Source)
  at javax.swing.JComponent.getPreferredSize(Unknown Source)
  at javax.swing.JList.getPreferredScrollableViewportSize(Unknown Source)
  at javax.swing.ViewportLayout.preferredLayoutSize(Unknown Source)
  at java.awt.Container.preferredSize(Unknown Source)
  at java.awt.Container.getPreferredSize(Unknown Source)
  at javax.swing.JComponent.getPreferredSize(Unknown Source)
  at javax.swing.ScrollPaneLayout.preferredLayoutSize(Unknown Source)
  at java.awt.Container.preferredSize(Unknown Source)
  at java.awt.Container.getPreferredSize(Unknown Source)
  at javax.swing.JComponent.getPreferredSize(Unknown Source)
  at java.awt.GridBagLayout.GetLayoutInfo(Unknown Source)
  at java.awt.GridBagLayout.getLayoutInfo(Unknown Source)
  at java.awt.GridBagLayout.ArrangeGrid(Unknown Source)
  at java.awt.GridBagLayout.arrangeGrid(Unknown Source)
  at java.awt.GridBagLayout.layoutContainer(Unknown Source)
  at java.awt.Container.layout(Unknown Source)
  at java.awt.Container.doLayout(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validateTree(Unknown Source)
  at java.awt.Container.validate(Unknown Source)
  at java.awt.Window.show(Unknown Source)
  at java.awt.Component.show(Unknown Source)
  at java.awt.Component.setVisible(Unknown Source)
  at java.awt.Window.setVisible(Unknown Source)
  at fr.ifremer.isisfish.IsisFish.launchUI(IsisFish.java:631)
  at fr.ifremer.isisfish.IsisFish.main(IsisFish.java:150)
 INFO [Thread-11] (CronService.java:77) run - Starting 1 registered services
 INFO [AWT-EventQueue-0] (SimulationStorage.java:463) getSimulation  
- Try to open simulation as_test_R_2011-01-24-14-21_0(D:\Documents  
and  
Settings\invhal\isis-database-3\simulations\as_test_R_2011-01-24-14-21_0)
 INFO [AWT-EventQueue-0] (RegionStorage.java:235) getRegion - Try to  
open region GolfeDeGascogneEcoMod_EC2010(D:\Documents and  
Settings\invhal\isis-database-3\regions\GolfeDeGascogneEcoMod_EC2010)
 INFO [AWT-EventQueue-0] (SimulAction.java:315) loadOldSimulation -  
Import design plan from : D:\Documents and  
Settings\invhal\isis-database-3\simulations\as_test_R_2011-01-24-14-21_0\isis-mexico-designplan.xml
 INFO [AWT-EventQueue-0] (DataStorage.java:205) getStorage - Create  
new storage for GolfeDeGascogneEcoMod_EC2010
 INFO [AWT-EventQueue-0] (TopiaContextImpl.java:199) loadServices -  
Le service topia.service.migration chargé par  
org.nuiton.topia.migration.TopiaMigrationServiceImpl
 INFO [AWT-EventQueue-0] (MigrationServiceImpl.java:226)  
migrateSchema - Starting Topia Migration Service
 INFO [AWT-EventQueue-0] (MigrationServiceImpl.java:252)  
migrateSchema - Application version : 3.3, database version : 3.3
 INFO [AWT-EventQueue-0] (Resource.java:361) getURLs - search URLs  
pattern: .*oldmappings/IsisFish/3.3/.*\.hbm\.xml in 84 urls in 1,804s
 INFO [AWT-EventQueue-0] (MigrationServiceImpl.java:286)  
migrateSchema - Database is up to date, no migration needed.
 INFO [AWT-EventQueue-0] (ExportHelper.java:149)  
populateSensitivityExport - DEBUG: set sensitivityexport param:  
sensitivityexport.0.parameter.pop =  
nephrops(fr.ifremer.isisfish.entities.Population#1223471368770#0.3058878391043739)
 INFO [AWT-EventQueue-0] (ExportHelper.java:149)  
populateSensitivityExport - DEBUG: set sensitivityexport param:  
sensitivityexport.1.parameter.pop =  
nephrops(fr.ifremer.isisfish.entities.Population#1223471368770#0.3058878391043739)
OpenMap(tm) Version 4.6.5
  Copyright (C) BBNT Solutions LLC.  All rights reserved.
  See http://openmap.bbn.com/ for details.
INFO [AWT-EventQueue-0] (RProxy.java:111) initOnJNI - Trying to  
initialize the R Proxy over JNI
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Re: [Isis-fish-users] Pb lancement AS - résolu! ;)

Sigrid.Lehuta＠ifremer.fr