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Re: [Isis-fish-users] create matrix a partir d 'un fichier csv avec semantics : RESOLU (oups)
by Sigrid Lehuta July 19, 2018

July 19, 2018

Je n'utilisais pas la bonne version d isis. bon par contre la methode n apparait pas dans l'APIU ... Sorry 2018-07-19 17:41 GMT+02:00 Sigrid Lehuta <sigridlehuta(a)gmail.com>: > > Bonjour, > j utilisais le nouveau format de matrices csv permettant d importer des > matrices dans isis avec les semantics. > Jusqu ici pour les importer jutilisais : > File discardRates = ... > MatrixND matDiscRates = MatrixFactory.getInstance().create(discardRates); > > aujourd hui ca ne compile plus ! j ai l erreur suivante : > ERROR in C:\Users\slehuta\isis-fish-4\isis-community-database\rules\OgiveRejet_OptionLO.java > (at line 112) > matDiscRates = MatrixFactory.getInstance().create(discardRates); > ^^^^^^ > The method create(int[]) in the type MatrixFactory is not applicable for > the arguments (File) > > Merci de votre aide ! > Sigrid >

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create matrix a partir d 'un fichier csv avec semantics
by Sigrid Lehuta July 19, 2018

July 19, 2018

Bonjour, j utilisais le nouveau format de matrices csv permettant d importer des matrices dans isis avec les semantics. Jusqu ici pour les importer jutilisais : File discardRates = ... MatrixND matDiscRates = MatrixFactory.getInstance().create(discardRates); aujourd hui ca ne compile plus ! j ai l erreur suivante : ERROR in C:\Users\slehuta\isis-fish-4\isis-community-database\rules\OgiveRejet_OptionLO.java (at line 112) matDiscRates = MatrixFactory.getInstance().create(discardRates); ^^^^^^ The method create(int[]) in the type MatrixFactory is not applicable for the arguments (File) Merci de votre aide ! Sigrid

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Ressources Isis-fish
by Postmaster ISIS-Fish June 30, 2018

June 30, 2018

Amis utilisateurs d'ISIS-Fish, Ce mail automatique, envoyé tous les 3 mois sur les listes de diffusions du projet, a pour but de vous rappeler toutes les ressources disponibles pour toutes vos éventuelles questions et problèmes. Documentation et manuel utilisateurs ------------------------------------ La documentation d'ISIS-Fish est présente sur le site à cette adresse : http://isis-fish.org/v4/index.html. N'hésitez pas à nous remonter les parties qui ne sont pas claires ou les parties qui ne sont pas à jour, le logiciel évoluant, certaines parties de la documentation sont peut-être obsolètes. Questions et FAQ ---------------- Vous pouvez poser vos questions à cette même liste de diffusion en envoyant un mail à isis-fish-users(a)list.isis-fish.org. Toutes les personnes abonnées le recevront et pourront répondre à vos éventuelles questions. N'oubliez pas, avant de poser votre question, de rechercher parmis les archives de la liste (http://list.isis-fish.org/pipermail/isis-fish-users/) votre question a peut-être déjà été posée. Les questions les plus fréquemment posées sont regroupées sur le site sur la page FAQ : http://isis-fish.org/v4/user/FAQ.html Forge, rapports de bug, suivi des évolutions -------------------------------------------- Si vous rencontrez un bug, vous pouvez vérifier sur la forge ISIS-Fish (http://forge.codelutin.com/projects/isis-fish/issues) si nous en avons déjà connaissance. Si nous n'en avons pas connaissance, vous pouvez nous rapporter le bug, nous l'intègrerons dans la liste des évolutions prévues (http://forge.codelutin.com/projects/isis-fish/roadmap) Pour rapporter un bug (ou une demande d'évolution), donnez nous le maximum de détails sur ce bug (comment vous l'avez obtenu ? votre base, vos paramètres et le fichier debug.txt). Plus nous avons d'informations, plus nous pourrons vous aider simplement. L'équipe ISIS-Fish

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L'API d'ISIS n'est plus en ligne
by Audric VIGIER May 31, 2018

May 31, 2018

Bonjour, Tout est dans le titre, Bonne journée, Audric

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[ANN] - ISIS-Fish 4.4.2.0 released
by Eric Chatellier May 17, 2018

May 17, 2018

The ISIS-Fish team is pleased to announce the isis-fish-4.4.2.0 release! Simulateur de pecherie complexe. Documentation of the project can be found here: http://isis-fish.org Changes ------- Changes in this version include: #590: Plantage de l'interface ISIS, les simulations tournent toujours #1456: Fermeture d'un contexte déjà clos en fin de plan de simulation #1612: Ajouter la possibilité de mettre des dépendances entre les résultats #3102: Non rechargement de l'interface de lancement de simulation dans le cas de region contenant des données très proches #3704: La matrice de distribution de recrutement reste en changeant de population #3956: AS sur Correspondance entre les zones de reproduction et de recrutement #5516: annuler creation de matrice d observation dans l interface de saisie #8828: Region non chargé si elle est la copie de la region courante #9240: Les fichiers d'objectifs java ne sont pas sauvegardé dans la simulation #9812: Assurer la compatibilité java 9 #9886: Impossible d'ajouter une carte en cas de différence dans le nom de la region #433: Ajouter un controle pour les saisons d'un metier #8845: Si InactivityEquation est utilisé dans la stratégie alors il faut griser sur l'onglet suivant les champs inactivité #9677: Lancer une exception si les équations ne compilent pas #9678: Améliorer le message de log "Erreur dans la migration, un coef est negatif" #9681: Gérer le cas ou l'on essaye de supprimer des objets utilisé à un autre endroit de la région (afficher un message specifiant que l'objet est encore utilisé) #9728: Pour ajouter des necessaryResult dans les équations Tâche #9811: Mise à jour des librairies Downloads --------- For a manual installation, you can download files here: https://forge.codelutin.com/projects/isis-fish/files * https://forge.codelutin.com/attachments/download/5209/isis-fish-4.4.2.0-bin… Have fun! -ISIS-Fish team -- Éric Chatellier - www.codelutin.com - 02.40.50.29.28

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error including a map in ISIS-Fish
by Silvia Angelini May 17, 2018

May 17, 2018

Dear all, I'm trying to upload a map on my ISIS-Fish case study, but I receive an error 'can't add map in region'. I tried different format but nothing... Any suggestion?! Thank you so much in advance. Silvia -- Dr. Silvia Angelini, Ph.D. Institute of Marine Science (CNR-ISMAR) Largo Fiera della Pesca 60125, Ancona, Italy Phone: 071-2078833 Fax: 071-55313 e-mail: silvia.angelini(a)an.ismar.cnr.it

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Re: [Isis-fish-users] can not open database
by Eric Chatellier April 27, 2018

April 27, 2018

Hi, To use isis fish's mailing list, you need to be registered for us to avoid spam. I just authorized your email to post without registering, you should be able to send mail now. To receive answer sent only to the mailing list, you still need to be registered. Regards, Eric Chatellier. Le 26/04/2018 à 11:29, Silvia Angelini a écrit : > Dear Isis-Fish-Users-Owner, > > I've sent various emails to the list trying to get help with Isis-Fish, but > they have been always rejected. Do I have to subscribe again to the mailing > list or correct some informations? > > Thank you so much for your help. > > Best Regards, > > Silvia -- Éric Chatellier - www.codelutin.com - 02.40.50.29.28

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Re: [Isis-fish-users] can not open database
by Sigrid Lehuta April 23, 2018

April 23, 2018

Hi Silvia 1) I found a mistake in the hake growth equation, T0 is declared as "T0" but then "t0" is used in the equation, please correct. 2) I noticed you are using the previous bersion, you can now download the latest 4.4.1.0. 3) Regarding your simulation Apparently you are trying to apply an effort reduction but there are no strategies selected. As for the population you need to clic on the strategy to select them for the simulation. Let me know if it works. 4) Attached you'll find a simulation I managed to run. Please unzip it in the simulation folder (C:\Users\youraccount\isis-fish-4\isis-database\simulations) with ISIS-Fish close. Then launch ISIS and in the simulation launch interface, try to "load old simulation" and select this one. Hopefully it should work... (at least with version 4.4.1.0) Keep in touch Best, Sigrid 2018-04-23 9:28 GMT+02:00 Silvia Angelini <s.angelini(a)an.ismar.cnr.it>: > Hi Sigrid, > > attached to this email, you can find the files you asked me. > > Thank you so much fo your help! > > Silvia > > Il 20/04/2018 18:28, Sigrid Lehuta ha scritto: > > Hi Silvia, > could you please copy the message contained in the window that appears > when you clic "show simulation log"? > Also could you send the file parameter.properties in the folder named > after you simulation at this location: > isis-fish-4\isis-database\simulations\ > thank you > > > 2018-04-19 15:11 GMT+02:00 Silvia Angelini <s.angelini(a)an.ismar.cnr.it>: > >> Hi Sigrid, >> >> I've managed to open the database, thanks for the suggestions! :) >> >> However the case study is not running (or I'm not launching the >> simulation in the right way), it's stops at month 0. In attached you can >> find the db. >> >> Thank you so much for your help. >> >> Silvia >> >> Il 19/04/2018 09:55, Sigrid Lehuta ha scritto: >> >> Hi Silvia, >> >> Do you already have the database charged in ISIS-Fish (I mean your own >> database)? if so, try to delete it (Region/remove locally OR if it doesn't >> work close ISIS-Fish and delete the region folder in >> isis-fish-4/isis-database/regions) and then to import the new database. >> I know this is a bug, we used to have and might not be corrected in this >> version. >> >> If you still fail in importing the region after that, could you please >> copy the full message written under "Details" in the error window and send >> it to the list together with the database? >> >> Thank you >> >> Sigrid >> >> >> Hi Sigrid, >> >> I've tried to open the db you sent us, but unfortunately it didn't work. >> I've tried using two different ISIS-Fish versions (4.4.0.2 and 4.4.1.0) but >> nothing; I've got this java error 'java.lang.reflect.InvocationTargetException'. >> Can you help me to solve the problem? >> >> Thank you so much in advance for your help. >> >> Silvia >> >> Il 05/04/2018 18:29, slehuta ha scritto: >> >> Hi Silvia and all, >> >> Thanks for sending your database. >> >> Actually there was 2 databases in the zip. I worked on SoS_2018. However >> there should only be one in the zip. How did you export them ? using the >> menu/export a region ? >> >> I had a look and managed to fix a few bugs (mainly in the equations : >> missing ";" or "lenght" instead of "length"). Nothing bad really but java >> is picky. You can "open the editor" for each equation and "check" them to >> avoid syntaxic errors like these. >> >> I used the button "check the region" at the root of the tree which >> indicates problems in the DB. >> >> Simulations are running for me with dummy numbers.Can you try again on >> your side using the attached DB? >> >> >> Congrats on this first try. >> >> Regards, >> >> Sigrid >> >> >> >> -- >> Dr. Silvia Angelini, Ph.D. >> Institute of Marine Science (CNR-ISMAR) >> Largo Fiera della Pesca >> 60125, Ancona, Italy >> Phone: 071-2078833 >> Fax: 071-55313 >> e-mail: silvia.angelini(a)an.ismar.cnr.it >> >> > > -- > Dr. Silvia Angelini, Ph.D. > Institute of Marine Science (CNR-ISMAR) > Largo Fiera della Pesca > 60125, Ancona, Italy > Phone: 071-2078833 > Fax: 071-55313 > e-mail: silvia.angelini(a)an.ismar.cnr.it > >

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Re: [Isis-fish-users] can not open database
by Sigrid Lehuta April 20, 2018

April 20, 2018

Hi Silvia, could you please copy the message contained in the window that appears when you clic "show simulation log"? Also could you send the file parameter.properties in the folder named after you simulation at this location: isis-fish-4\isis-database\simulations\ thank you 2018-04-19 15:11 GMT+02:00 Silvia Angelini <s.angelini(a)an.ismar.cnr.it>: > Hi Sigrid, > > I've managed to open the database, thanks for the suggestions! :) > > However the case study is not running (or I'm not launching the simulation > in the right way), it's stops at month 0. In attached you can find the db. > > Thank you so much for your help. > > Silvia > > Il 19/04/2018 09:55, Sigrid Lehuta ha scritto: > > Hi Silvia, > > Do you already have the database charged in ISIS-Fish (I mean your own > database)? if so, try to delete it (Region/remove locally OR if it doesn't > work close ISIS-Fish and delete the region folder in > isis-fish-4/isis-database/regions) and then to import the new database. I > know this is a bug, we used to have and might not be corrected in this > version. > > If you still fail in importing the region after that, could you please > copy the full message written under "Details" in the error window and send > it to the list together with the database? > > Thank you > > Sigrid > > > Hi Sigrid, > > I've tried to open the db you sent us, but unfortunately it didn't work. > I've tried using two different ISIS-Fish versions (4.4.0.2 and 4.4.1.0) but > nothing; I've got this java error 'java.lang.reflect.InvocationTargetException'. > Can you help me to solve the problem? > > Thank you so much in advance for your help. > > Silvia > > Il 05/04/2018 18:29, slehuta ha scritto: > > Hi Silvia and all, > > Thanks for sending your database. > > Actually there was 2 databases in the zip. I worked on SoS_2018. However > there should only be one in the zip. How did you export them ? using the > menu/export a region ? > > I had a look and managed to fix a few bugs (mainly in the equations : > missing ";" or "lenght" instead of "length"). Nothing bad really but java > is picky. You can "open the editor" for each equation and "check" them to > avoid syntaxic errors like these. > > I used the button "check the region" at the root of the tree which > indicates problems in the DB. > > Simulations are running for me with dummy numbers.Can you try again on > your side using the attached DB? > > > Congrats on this first try. > > Regards, > > Sigrid > > > > -- > Dr. Silvia Angelini, Ph.D. > Institute of Marine Science (CNR-ISMAR) > Largo Fiera della Pesca > 60125, Ancona, Italy > Phone: 071-2078833 > Fax: 071-55313 > e-mail: silvia.angelini(a)an.ismar.cnr.it > >

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can not open database
by Sigrid Lehuta April 19, 2018

April 19, 2018

Hi Silvia, Do you already have the database charged in ISIS-Fish (I mean your own database)? if so, try to delete it (Region/remove locally OR if it doesn't work close ISIS-Fish and delete the region folder in isis-fish-4/isis-database/regions) and then to import the new database. I know this is a bug, we used to have and might not be corrected in this version. If you still fail in importing the region after that, could you please copy the full message written under "Details" in the error window and send it to the list together with the database? Thank you Sigrid Hi Sigrid, I've tried to open the db you sent us, but unfortunately it didn't work. I've tried using two different ISIS-Fish versions (4.4.0.2 and 4.4.1.0) but nothing; I've got this java error 'java.lang.reflect.InvocationTargetException'. Can you help me to solve the problem? Thank you so much in advance for your help. Silvia Il 05/04/2018 18:29, slehuta ha scritto: Hi Silvia and all, Thanks for sending your database. Actually there was 2 databases in the zip. I worked on SoS_2018. However there should only be one in the zip. How did you export them ? using the menu/export a region ? I had a look and managed to fix a few bugs (mainly in the equations : missing ";" or "lenght" instead of "length"). Nothing bad really but java is picky. You can "open the editor" for each equation and "check" them to avoid syntaxic errors like these. I used the button "check the region" at the root of the tree which indicates problems in the DB. Simulations are running for me with dummy numbers.Can you try again on your side using the attached DB? Congrats on this first try. Regards, Sigrid

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